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Ashan Dayananda
Ashan Dayananda
U.S. Military HIV Research Program | HJF for the Advancement of Military Medicine
Verified email at hivresearch.org
Title
Cited by
Cited by
Year
Factors underlying asymmetric pore dynamics of disaggregase and microtubule-severing AAA+ machines
M Damre, A Dayananda, RA Varikoti, G Stan, RI Dima
Biophysical Journal 120 (16), 3437-3454, 2021
82021
Allosteric communication in the gating mechanism for controlled protein degradation by the bacterial ClpP peptidase
A Dayananda, TS Dennison, HYY Fonseka, MS Avestan, Q Wang, ...
The Journal of Chemical Physics 158 (12), 2023
52023
Design, Rationalization, and Automation of a Catalytic Sensing Mechanism for Homogeneous SERS Biosensors
SM Quarin, AC Macke, LN Kissell, MS Kelly, A Dayananda, J Ungvary, ...
ACS sensors 8 (5), 2000-2010, 2023
32023
Probing allosteric mechanisms of the Hsp104 disaggregase using machine learning techniques
T Rajaguru, S Jayasekara, A Dayananda, G Stan
Biophysical Journal 123 (3), 63a, 2024
2024
Probing allosteric communication in the ClpB AAA+ disaggregase
Z Zhang, A Dayananda, G Haran, G Stan
Biophysical Journal 123 (3), 64a, 2024
2024
Single-molecule FRET probes allosteric effects on protein-translocating pore loops of a AAA+ machine
M Iljina, H Mazal, A Dayananda, Z Zhang, G Stan, I Riven, G Haran
Biophysical Journal 123 (3), 374-388, 2024
2024
Probing Asymmetric Conformational Dynamics and Allosteric Regulation of Clp Biological Nanomachines using Machine Learning and Molecular Dynamics Simulations
AC Dayananda
University of Cincinnati, 2023
2023
Probing Allosteric Communication of Bacterial ClpP Peptidase using Dynamic Network Analysis and Machine Learning
A Dayananda, TS Dennison, R Tehver, G Stan
APS March Meeting Abstracts 2023, D08. 001, 2023
2023
Structure-Based Modeling and Machine Learning to Study Dynamic Asymmetry of ClpB Disaggregase Nanomachine
T Weidle, A Dayananda, G Stan
Undergraduate Scholarly Showcase 4 (1), 2022
2022
Conformational dynamics of the ClpB AAA+ protein disaggregase: molecular dynamics studies
A Dayananda, RI Dima, G Stan
Biophysical Journal 121 (3), 459a, 2022
2022
Asymmetric Conformational Dynamics of the ClpB Disaggregase Nanomachine
A Dayananda, R Dima, G Stan
APS March Meeting Abstracts 2022, N06. 002, 2022
2022
Computational Studies of Asymmetric Conformational Dynamics of AAA+ Machines Involved in Protein Disaggregation
A Dayananda, R Dima, G Stan
APS March Meeting Abstracts 2021, E12. 004, 2021
2021
Factors Underlying Asymmetric Dynamics of Disaggregase and Microtubule Severing AAA+ Machines
M Damre, A Dayananda, RA Varikoti, G Stan, RI Dima
bioRxiv, 2020.11. 25.398420, 2020
2020
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